STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001604annotation not available (322 aa)    
Predicted Functional Partners:
AXIN1
Axin 1.
    
 0.982
AXIN2
Axin 2.
    
 0.978
ENSODEP00000012766
annotation not available
   
 0.976
ENSODEP00000015502
annotation not available
   
 0.976
JUP
Junction plakoglobin.
   
 0.967
LOC101592056
annotation not available
  
 
0.951
ENSODEP00000010526
annotation not available
  
 
0.940
ENSODEP00000022372
annotation not available
  
 
0.940
ENSODEP00000018854
annotation not available
   
  0.932
ENSODEP00000021380
annotation not available
   
  0.932
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.