STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDST4N-deacetylase and N-sulfotransferase 4. (872 aa)    
Predicted Functional Partners:
NDST3
N-deacetylase and N-sulfotransferase 3.
   
  0.991
GLCE
Glucuronic acid epimerase.
   
 0.987
Ndst2
N-deacetylase and N-sulfotransferase 2.
    
  0.979
NDST1
N-deacetylase and N-sulfotransferase 1.
     
  0.942
ENSODEP00000018958
annotation not available
      
 0.756
ENSODEP00000006373
annotation not available
    
 0.746
GPC3
Glypican 3.
    
 0.746
GPC6
Glypican 6.
    
 0.709
GPC1
Glypican 1.
    
 0.709
GPC4
Glypican 4.
    
 0.709
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.