STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP10DATPase phospholipid transporting 10D (putative). (1421 aa)    
Predicted Functional Partners:
ATP11A
ATPase phospholipid transporting 11A.
    
 0.930
TMEM30B
Transmembrane protein 30B.
    
 0.893
ENSODEP00000008920
annotation not available
    
 0.854
ENSODEP00000005213
annotation not available
    
 0.841
ENSODEP00000006205
annotation not available
    
 0.841
ENSODEP00000015555
annotation not available
    
 0.841
ATP11C
ATPase phospholipid transporting 11C.
    
 0.778
ATP11B
ATPase phospholipid transporting 11B (putative).
    
 0.778
NME8
NME/NM23 family member 8.
   
 0.777
ATP9B
ATPase phospholipid transporting 9B (putative).
    
 0.775
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.