STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001612annotation not available (321 aa)    
Predicted Functional Partners:
ENSODEP00000001601
annotation not available
 
     0.922
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
   0.801
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
   0.741
ENSODEP00000000433
annotation not available
    
 
 0.684
ATP6V1G3
ATPase H+ transporting V1 subunit G3.
    
 
 0.684
ENSODEP00000021694
annotation not available
    
 
 0.684
ATP6V1G2
ATPase H+ transporting V1 subunit G2.
    
 
 0.684
NOM1
Nucleolar protein with MIF4G domain 1.
   
    0.676
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
   0.577
ENSODEP00000019565
annotation not available
    
   0.577
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.