STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNCCyclin C. (283 aa)    
Predicted Functional Partners:
MED14
Mediator complex subunit 14.
   
 0.995
MED12
Mediator complex subunit 12.
    
 0.994
MED13
Mediator complex subunit 13.
    
 0.994
MED1
Mediator complex subunit 1.
    
 0.994
MED18
Mediator complex subunit 18.
   
 0.993
MED23
Mediator complex subunit 23.
    
 0.993
MED22
Mediator complex subunit 22.
   
 0.993
MED16
Mediator complex subunit 16.
    
 0.992
MED30
Mediator complex subunit 30.
    
 0.991
MED13L
Mediator complex subunit 13L.
    
 0.991
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.