close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A9Solute carrier family 16 member 9. (510 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor IIIC subunit 5.
    
 0.930
LOC101578331
annotation not available
    
 0.856
ENSODEP00000013563
annotation not available
    
 0.856
ENSODEP00000000723
annotation not available
    
 0.832
BSG
Basigin (Ok blood group).
    
 0.796
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.684
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.684
SLC22A5
Solute carrier family 22 member 5.
    
 
 0.619
SLC22A23
Solute carrier family 22 member 23.
   
 
 0.570
RRAGD
Ras related GTP binding D.
     
 0.570
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.