Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POU3F2POU class 3 homeobox 2. (370 aa)    
Predicted Functional Partners:
SOX3
SRY-box transcription factor 3.
    
 0.830
SOX2
SRY-box transcription factor 2.
    
 0.830
SOX15
SRY-box transcription factor 15.
    
 0.814
C11orf53
Chromosome 11 open reading frame 53.
    
 
 0.767
SOX21
SRY-box transcription factor 21.
    
 0.755
SOX14
SRY-box transcription factor 14.
    
 0.755
NPAS3
Neuronal PAS domain protein 3.
   
 0.754
NPAS1
Neuronal PAS domain protein 1.
    
 0.753
PAX4
Paired box 4.
   
 0.748
BSX
Brain specific homeobox.
    
 0.722
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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