POU3F2 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

POU3F2

POU class 3 homeobox 2. (370 aa)

Predicted Functional Partners:

BSX

0.728

PCF11

0.712

SOX10

0.712

SOX8

0.708

SOX9

0.706

SOX30

0.688

ENSODEP00000007860

0.677

ENSODEP00000014855

0.677

SALL3

0.673

SALL1

0.672

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSX	POU3F2	ENSODEP00000008348	ENSODEP00000001633	Brain specific homeobox.	POU class 3 homeobox 2.	0.728
BSX	SALL1	ENSODEP00000008348	ENSODEP00000004858	Brain specific homeobox.	Spalt like transcription factor 1.	0.892
BSX	SALL3	ENSODEP00000008348	ENSODEP00000003515	Brain specific homeobox.	Spalt like transcription factor 3.	0.892
BSX	SOX10	ENSODEP00000008348	ENSODEP00000016041	Brain specific homeobox.	SRY-box transcription factor 10.	0.700
BSX	SOX30	ENSODEP00000008348	ENSODEP00000012774	Brain specific homeobox.	SRY-box transcription factor 30.	0.700
BSX	SOX8	ENSODEP00000008348	ENSODEP00000021602	Brain specific homeobox.	SRY-box transcription factor 8.	0.700
BSX	SOX9	ENSODEP00000008348	ENSODEP00000014106	Brain specific homeobox.	SRY-box transcription factor 9.	0.700
ENSODEP00000007860	PCF11	ENSODEP00000007860	ENSODEP00000005118	annotation not available	PCF11 cleavage and polyadenylation factor subunit.	0.828
ENSODEP00000007860	POU3F2	ENSODEP00000007860	ENSODEP00000001633	annotation not available	POU class 3 homeobox 2.	0.677
ENSODEP00000014855	PCF11	ENSODEP00000014855	ENSODEP00000005118	annotation not available	PCF11 cleavage and polyadenylation factor subunit.	0.828
ENSODEP00000014855	POU3F2	ENSODEP00000014855	ENSODEP00000001633	annotation not available	POU class 3 homeobox 2.	0.677
PCF11	ENSODEP00000007860	ENSODEP00000005118	ENSODEP00000007860	PCF11 cleavage and polyadenylation factor subunit.	annotation not available	0.828
PCF11	ENSODEP00000014855	ENSODEP00000005118	ENSODEP00000014855	PCF11 cleavage and polyadenylation factor subunit.	annotation not available	0.828
PCF11	POU3F2	ENSODEP00000005118	ENSODEP00000001633	PCF11 cleavage and polyadenylation factor subunit.	POU class 3 homeobox 2.	0.712
POU3F2	BSX	ENSODEP00000001633	ENSODEP00000008348	POU class 3 homeobox 2.	Brain specific homeobox.	0.728
POU3F2	ENSODEP00000007860	ENSODEP00000001633	ENSODEP00000007860	POU class 3 homeobox 2.	annotation not available	0.677
POU3F2	ENSODEP00000014855	ENSODEP00000001633	ENSODEP00000014855	POU class 3 homeobox 2.	annotation not available	0.677
POU3F2	PCF11	ENSODEP00000001633	ENSODEP00000005118	POU class 3 homeobox 2.	PCF11 cleavage and polyadenylation factor subunit.	0.712
POU3F2	SALL1	ENSODEP00000001633	ENSODEP00000004858	POU class 3 homeobox 2.	Spalt like transcription factor 1.	0.672
POU3F2	SALL3	ENSODEP00000001633	ENSODEP00000003515	POU class 3 homeobox 2.	Spalt like transcription factor 3.	0.673