Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001634annotation not available (334 aa)    
Predicted Functional Partners:
LARP1
La ribonucleoprotein 1, translational regulator.
   
   0.929
ENSODEP00000003103
annotation not available
 
      0.899
ENSODEP00000000656
annotation not available
   
 
 0.796
ENSODEP00000016055
annotation not available
   
 
 0.796
KIF2A
Kinesin family member 2A.
    
   0.795
CHAC2
ChaC cation transport regulator homolog 2.
    
 0.787
ENSODEP00000000443
annotation not available
   
 
 0.786
NCBP1
Nuclear cap binding protein subunit 1.
    
 
 0.786
Dhx15
annotation not available
   
 
 0.786
CHAC1
ChaC glutathione specific gamma-glutamylcyclotransferase 1.
    
 0.781
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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