STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF18Zinc finger protein 18. (521 aa)    
Predicted Functional Partners:
ZNF446
Zinc finger protein 446.
    
 
 0.950
SCAND1
SCAN domain containing 1.
    
   0.950
TTC32
Tetratricopeptide repeat domain 32.
    
  0.884
ZNF174
Zinc finger protein 174.
    
 
 0.878
ZNF483
Zinc finger protein 483.
    
 
 0.866
ENSODEP00000001557
annotation not available
    
 
 0.854
CCNC
Cyclin C.
    
 
 0.854
ENSODEP00000025351
annotation not available
    
 0.783
ZBTB24
Zinc finger and BTB domain containing 24.
   
   0.749
NME8
NME/NM23 family member 8.
    
 0.692
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.