Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SH3PXD2BSH3 and PX domains 2B. (870 aa)    
Predicted Functional Partners:
ADAM15
ADAM metallopeptidase domain 15.
    
 0.874
PAK1
P21 (RAC1) activated kinase 1.
    
 0.826
ENSODEP00000008139
annotation not available
    
 0.826
PAK2
P21 (RAC1) activated kinase 2.
    
 0.826
PAK3
P21 (RAC1) activated kinase 3.
    
 0.826
PAK4
P21 (RAC1) activated kinase 4.
    
 0.826
PAK6
Serine/threonine-protein kinase PAK 6.
    
 0.826
WASL
WASP like actin nucleation promoting factor.
   
 0.825
NCK2
NCK adaptor protein 2.
    
 
 0.789
ARHGEF4
Rho guanine nucleotide exchange factor 4.
    
 0.781
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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