STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001642annotation not available (104 aa)    
Predicted Functional Partners:
ENSODEP00000007003
annotation not available
    
 0.931
INTS3
Integrator complex subunit 3.
    
 
 0.926
NABP1
Nucleic acid binding protein 1.
    
 0.906
ENSODEP00000008001
annotation not available
    
 
 0.856
INTS2
Integrator complex subunit 2.
    
 
 0.804
INTS1
Integrator complex subunit 1.
    
 
 0.780
INTS7
Integrator complex subunit 7.
    
 
 0.762
INTS5
Integrator complex subunit 5.
    
 
 0.760
INTS6
Integrator complex subunit 6.
    
 
 0.759
INTS8
Integrator complex subunit 8.
    
 
 0.750
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.