STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ART3ADP-ribosyltransferase 3. (334 aa)    
Predicted Functional Partners:
ENSODEP00000017643
annotation not available
  
 0.922
NFU1
NFU1 iron-sulfur cluster scaffold.
  
 0.895
LIPT1
Lipoyltransferase 1.
  
 
 0.824
LIPT2
Lipoyl(octanoyl) transferase 2.
  
 
 0.779
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
  
 
 0.779
DNALI1
Dynein axonemal light intermediate chain 1.
      
 0.757
IFT80
Intraflagellar transport 80.
     
 0.756
CXCL11
C-X-C motif chemokine ligand 11.
      
 0.752
IFT122
Intraflagellar transport 122.
     
 0.708
TMCO2
Transmembrane and coiled-coil domains 2.
      
 0.685
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.