STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ART3ADP-ribosyltransferase 3. (334 aa)    
Predicted Functional Partners:
LIPT1
Lipoyltransferase 1.
  
 
 0.913
LIPT2
Lipoyl(octanoyl) transferase 2.
  
 
 0.883
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
  
 
 0.883
ENSODEP00000017643
annotation not available
   
 0.853
NUDT15
Nudix hydrolase 15.
    
  0.776
SELENOO
Selenoprotein O.
    
  0.689
ENSODEP00000006300
annotation not available
  
 
 0.676
ENSODEP00000006739
annotation not available
  
 
 0.676
BTD
Biotinidase.
  
 
 0.676
VNN1
Vanin 1.
  
 
 0.676
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.