Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E2F8E2F transcription factor 8. (859 aa)    
Predicted Functional Partners:
ENSODEP00000011524
annotation not available
   
 0.989
KIF11
Kinesin family member 11.
   
  
 0.953
KIF15
Kinesin family member 15.
   
  
 0.926
ENSODEP00000006176
annotation not available
   
  
 0.921
KIF20A
Kinesin family member 20A.
   
  
 0.907
CCNA2
Cyclin A2.
   
 
 0.904
ENSODEP00000011772
annotation not available
   
  
 0.891
TOP2A
DNA topoisomerase II alpha.
   
  
 0.891
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
  
 0.885
ENSODEP00000014876
annotation not available
   
  
 0.883
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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