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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IYDIodotyrosine deiodinase. (285 aa)    
Predicted Functional Partners:
EPHX2
Epoxide hydrolase 2.
  
 
 0.937
RFK
Riboflavin kinase.
    
 0.921
METAP1D
Methionyl aminopeptidase type 1D, mitochondrial.
  
 
 0.916
MCEE
methylmalonyl-CoA epimerase.
  
  
 0.913
GLO1
Glyoxalase I.
  
  
 0.913
UROD
Uroporphyrinogen decarboxylase.
    
 0.890
ENDOV
Endonuclease V.
    
 0.890
ENSODEP00000017096
annotation not available
  
 
 0.885
ENSODEP00000024143
annotation not available
  
 
 0.885
Rnaseh1
Ribonuclease H1.
    
 0.883
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.