Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IYDIodotyrosine deiodinase. (285 aa)    
Predicted Functional Partners:
EPHX2
Epoxide hydrolase 2.
  
 
 0.907
RFK
Riboflavin kinase.
    
 0.884
TRIM69
Tripartite motif containing 69.
    
 
 0.884
METAP1D
Methionyl aminopeptidase type 1D, mitochondrial.
  
 
 0.883
MMAB
Metabolism of cobalamin associated B.
    
 0.827
FDX1
Ferredoxin 1.
    
 0.821
ENSODEP00000022634
annotation not available
    
 0.821
Rnaseh1
Ribonuclease H1.
    
 0.820
ENSODEP00000017096
annotation not available
  
 
 0.809
ENSODEP00000024143
annotation not available
  
 
 0.809
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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