STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001663annotation not available (341 aa)    
Predicted Functional Partners:
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.992
NGLY1
N-glycanase 1.
    
 0.981
GET4
Guided entry of tail-anchored proteins factor 4.
    
 0.977
PSMD2
Proteasome 26S subunit, non-ATPase 2.
    
 0.974
ENSODEP00000024666
annotation not available
   
 0.969
FANCD2
FA complementation group D2.
    
 0.967
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.963
FANCI
FA complementation group I.
    
 0.963
ENSODEP00000009779
annotation not available
   
 0.962
TRAF7
TNF receptor associated factor 7.
    
 0.962
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.