STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001675annotation not available (232 aa)    
Predicted Functional Partners:
PGM1
Phosphoglucomutase 1.
   
 0.972
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.957
DERA
Deoxyribose-phosphate aldolase.
  
 
 0.945
PGM5
Phosphoglucomutase 5.
   
 0.938
GPI
Glucose-6-phosphate isomerase.
  
 
 0.938
TKT
Transketolase.
  
 0.936
ENSODEP00000015704
annotation not available
  
 
 0.935
ENSODEP00000017800
annotation not available
  
 
 0.935
IFT80
Intraflagellar transport 80.
  
 
 0.933
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
  
 0.932
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.