STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1958KIAA1958. (739 aa)    
Predicted Functional Partners:
SETD4
SET domain containing 4.
      
 0.792
SOCS3
Suppressor of cytokine signaling 3.
    
   0.767
DEK
DEK proto-oncogene.
    
  0.629
XRCC6
X-ray repair cross complementing 6.
    
   0.629
ENSODEP00000017540
annotation not available
    
  0.619
CREBBP
CREB binding protein.
    
  0.619
B4GALT6
Beta-1,4-galactosyltransferase 6.
      
 0.619
STMND1
Stathmin domain containing 1.
      
 0.599
TTC38
Tetratricopeptide repeat domain 38.
      
 0.599
GASK1A
Golgi associated kinase 1A.
      
 0.598
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.