Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001678annotation not available (178 aa)    
Predicted Functional Partners:
ENSODEP00000017980
annotation not available
    
 0.979
ENSODEP00000026997
annotation not available
    
 0.979
CCM2L
CCM2 like scaffold protein.
    
 0.946
STK26
Serine/threonine kinase 26.
   
 
 0.936
CTTNBP2NL
CTTNBP2 N-terminal like.
    
 
 0.935
STRIP1
Striatin interacting protein 1.
    
 
 0.932
STRN3
Striatin 3.
    
 
 0.925
STRN4
Striatin 4.
    
 
 0.925
STRN
Striatin.
    
 
 0.925
FGFR1OP2
FGFR1 oncogene partner 2.
   
 
 0.920
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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