STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbp1annotation not available (524 aa)    
Predicted Functional Partners:
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
 
 0.862
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.854
ENSODEP00000005196
annotation not available
    
 
 0.820
ENSODEP00000005880
annotation not available
    
 
 0.820
RMND5B
Required for meiotic nuclear division 5 homolog B.
    
 
 0.773
ARMC8
Armadillo repeat containing 8.
    
 
 0.762
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.749
ATXN1
Ataxin 1.
    
 
 0.747
WDR26
WD repeat domain 26.
    
 
 0.741
RB1
RB transcriptional corepressor 1.
    
 
 0.718
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.