STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001682annotation not available (335 aa)    
Predicted Functional Partners:
TTC9B
Tetratricopeptide repeat domain 9B.
      
 0.585
PNPLA8
Patatin like phospholipase domain containing 8.
      
 0.554
PXDC1
PX domain containing 1.
      
 0.547
PCIF1
PDX1 C-terminal inhibiting factor 1.
      
 0.547
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
      
 0.547
RSBN1L
Round spermatid basic protein 1 like.
      
 0.543
FAM118A
Family with sequence similarity 118 member A.
      
 0.540
NUDCD1
NudC domain containing 1.
      
 0.539
ZNF668
Zinc finger protein 668.
      
 0.538
ENSODEP00000003336
annotation not available
      
 0.537
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.