STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACSM1acyl-CoA synthetase medium chain family member 1. (578 aa)    
Predicted Functional Partners:
ACADS
acyl-CoA dehydrogenase short chain.
  
 
 0.970
LIPT1
Lipoyltransferase 1.
    
 0.970
GBP5
Guanylate binding protein 5.
    
   0.950
ACSM5
acyl-CoA synthetase medium chain family member 5.
   
  0.944
ACSM4
acyl-CoA synthetase medium chain family member 4.
   
  0.935
ACSM3
acyl-CoA synthetase medium chain family member 3.
   
  0.935
ENSODEP00000007738
annotation not available
  
 
 0.888
ENSODEP00000007826
annotation not available
  
 
 0.888
ENSODEP00000000474
annotation not available
  
 
 0.887
ENSODEP00000001739
annotation not available
  
 
 0.887
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.