STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIM2Lens intrinsic membrane protein 2. (173 aa)    
Predicted Functional Partners:
ATP6V1F
ATPase H+ transporting V1 subunit F.
  
 0.996
ATP6V0B
ATPase H+ transporting V0 subunit b.
  
 0.994
ATP6V0C
ATPase H+ transporting V0 subunit c.
  
 0.993
ENSODEP00000001166
annotation not available
  
 0.992
ATP6V1D
ATPase H+ transporting V1 subunit D.
  
 0.992
ATP6V1H
ATPase H+ transporting V1 subunit H.
   
 0.991
ATP6V0D2
ATPase H+ transporting V0 subunit d2.
  
 0.991
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
  
 0.991
ENSODEP00000007400
annotation not available
  
 0.988
ENSODEP00000013155
annotation not available
  
 0.988
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.