STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001686annotation not available (166 aa)    
Predicted Functional Partners:
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 0.995
ENSODEP00000000287
annotation not available
   
 0.980
ENSODEP00000006828
annotation not available
   
 0.980
ENSODEP00000006178
annotation not available
   
 0.978
TADA3
Transcriptional adaptor 3.
    
 0.972
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
   
 0.965
DR1
Down-regulator of transcription 1.
    
 0.965
SGF29
SAGA complex associated factor 29.
   
 0.965
SMIM13
Small integral membrane protein 13.
   
 0.958
MBIP
MAP3K12 binding inhibitory protein 1.
    
 0.946
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.