Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001686annotation not available (166 aa)    
Predicted Functional Partners:
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 0.965
ENSODEP00000006178
annotation not available
   
 0.932
ENSODEP00000006828
annotation not available
   
 0.932
TADA3
Transcriptional adaptor 3.
    
 0.905
ENSODEP00000012702
annotation not available
   
 
 0.892
HYPK
Huntingtin interacting protein K.
   
 
 0.892
DR1
Down-regulator of transcription 1.
   
 0.891
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
    
 0.870
SGF29
SAGA complex associated factor 29.
    
 0.870
MBIP
MAP3K12 binding inhibitory protein 1.
    
 0.861
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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