STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001690annotation not available (268 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.996
MARS1
methionyl-tRNA synthetase 1.
   
 0.988
RARS1
arginyl-tRNA synthetase 1.
   
 0.980
LARS1
leucyl-tRNA synthetase 1.
    
 0.974
DARS1
aspartyl-tRNA synthetase 1.
   
 0.968
ENSODEP00000007952
annotation not available
   
 0.959
ENSODEP00000011178
annotation not available
   
 0.959
ENSODEP00000014345
annotation not available
   
 0.959
ENSODEP00000025831
annotation not available
   
 0.959
ENSODEP00000001457
annotation not available
   
 0.956
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.