STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001692annotation not available (172 aa)    
Predicted Functional Partners:
CENPH
Centromere protein H.
   
 0.996
CENPQ
Centromere protein Q.
   
 0.991
CENPM
Centromere protein M.
   
 0.990
CENPN
Centromere protein N.
   
 0.990
CENPU
Centromere protein U.
   
 0.988
CENPT
Centromere protein T.
   
 0.987
CENPW
Centromere protein W.
   
 0.986
ENSODEP00000003197
annotation not available
   
 0.984
ENSODEP00000007345
annotation not available
   
 0.984
ENSODEP00000013129
annotation not available
   
 0.984
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.