STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001699annotation not available (233 aa)    
Predicted Functional Partners:
CDC25B
Cell division cycle 25B.
    
 0.978
CDC25A
Cell division cycle 25A.
    
 0.972
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.965
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.965
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.960
YWHAG
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma.
  
0.954
ENSODEP00000025285
annotation not available
  
0.954
ENSODEP00000020581
annotation not available
  
0.953
YAP1
Yes associated protein 1.
    
 0.950
BAD
BCL2 associated agonist of cell death.
    
 0.943
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.