STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRA3Gamma-aminobutyric acid type A receptor alpha3 subunit. (491 aa)    
Predicted Functional Partners:
GPHN
Gephyrin.
    
 0.991
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
   
 0.980
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
   
 
 0.972
TRAK2
Trafficking kinesin protein 2.
     
 0.967
PLCL1
Phospholipase C like 1 (inactive).
     
 0.966
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit.
   
 0.959
TRAK1
Trafficking kinesin protein 1.
     
 0.956
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
  0.954
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
 0.951
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.949
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.