STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001703annotation not available (229 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.954
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.929
ENSODEP00000024866
annotation not available
    
 0.929
ENSODEP00000025351
annotation not available
    
 0.890
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.876
KLK7
Kallikrein related peptidase 7.
  
 
 
0.857
SPINK5
Serine peptidase inhibitor, Kazal type 5.
   
 0.857
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
    
 0.807
TNR
Tenascin R.
    
  0.794
TNN
Tenascin N.
    
  0.794
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.