STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001703annotation not available (229 aa)    
Predicted Functional Partners:
SPINK5
Serine peptidase inhibitor, Kazal type 5.
   
 0.931
SPINK6
Serine peptidase inhibitor, Kazal type 6.
    
 0.808
Klk8
annotation not available
   
 
  0.800
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
    
 0.782
CTRC
Chymotrypsin C.
  
 
0.735
ENSODEP00000022590
annotation not available
  
 
0.734
PGC
Progastricsin.
    
 0.733
GRM7
Glutamate metabotropic receptor 7.
   
 0.726
F2RL1
F2R like trypsin receptor 1.
    
 0.718
NME8
NME/NM23 family member 8.
   
 0.706
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.