STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001704annotation not available (683 aa)    
Predicted Functional Partners:
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.989
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.988
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.936
ENSODEP00000006187
annotation not available
    
 0.916
ENSODEP00000008349
annotation not available
    
 0.916
SIGLEC1
Sialic acid binding Ig like lectin 1.
   
 0.831
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.830
JAK3
Janus kinase 3.
    
 0.781
NCAM1
Neural cell adhesion molecule 1.
    
 0.773
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.773
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.