Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001705annotation not available (403 aa)    
Predicted Functional Partners:
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
   
 0.996
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
   
 0.996
DYNC1I2
Dynein cytoplasmic 1 intermediate chain 2.
   
 0.996
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.995
Dctn1
Dynactin subunit 1.
   
 0.993
DCTN2
Dynactin subunit 2.
   
 0.988
ENSODEP00000001054
annotation not available
    
 0.987
ENSODEP00000025315
annotation not available
    
 0.987
DYNLL2
Dynein light chain LC8-type 2.
    
 0.985
ENSODEP00000005241
annotation not available
    
 0.983
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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