ENSODEP00000001735 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSODEP00000001735

annotation not available (373 aa)

Predicted Functional Partners:

ENSODEP00000025351

0.841

NTNG1

0.765

Tonsl

0.745

MET

0.705

ENSODEP00000024866

0.705

Eef1g

0.629

ENSODEP00000011754

0.629

ENSODEP00000026159

0.629

ADGRL3

0.609

ADGRL2

0.609

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	ADGRL3	ENSODEP00000005456	ENSODEP00000002640	Adhesion G protein-coupled receptor L2.	Adhesion G protein-coupled receptor L3.	0.919
ADGRL2	ENSODEP00000001735	ENSODEP00000005456	ENSODEP00000001735	Adhesion G protein-coupled receptor L2.	annotation not available	0.609
ADGRL2	ENSODEP00000024866	ENSODEP00000005456	ENSODEP00000024866	Adhesion G protein-coupled receptor L2.	annotation not available	0.421
ADGRL2	MET	ENSODEP00000005456	ENSODEP00000001269	Adhesion G protein-coupled receptor L2.	MET proto-oncogene, receptor tyrosine kinase.	0.421
ADGRL2	NTNG1	ENSODEP00000005456	ENSODEP00000007293	Adhesion G protein-coupled receptor L2.	Netrin G1.	0.518
ADGRL2	Tonsl	ENSODEP00000005456	ENSODEP00000017310	Adhesion G protein-coupled receptor L2.	Tonsoku like, DNA repair protein.	0.402
ADGRL3	ADGRL2	ENSODEP00000002640	ENSODEP00000005456	Adhesion G protein-coupled receptor L3.	Adhesion G protein-coupled receptor L2.	0.919
ADGRL3	ENSODEP00000001735	ENSODEP00000002640	ENSODEP00000001735	Adhesion G protein-coupled receptor L3.	annotation not available	0.609
ADGRL3	ENSODEP00000024866	ENSODEP00000002640	ENSODEP00000024866	Adhesion G protein-coupled receptor L3.	annotation not available	0.421
ADGRL3	MET	ENSODEP00000002640	ENSODEP00000001269	Adhesion G protein-coupled receptor L3.	MET proto-oncogene, receptor tyrosine kinase.	0.421
ADGRL3	NTNG1	ENSODEP00000002640	ENSODEP00000007293	Adhesion G protein-coupled receptor L3.	Netrin G1.	0.608
ADGRL3	Tonsl	ENSODEP00000002640	ENSODEP00000017310	Adhesion G protein-coupled receptor L3.	Tonsoku like, DNA repair protein.	0.402
ENSODEP00000001735	ADGRL2	ENSODEP00000001735	ENSODEP00000005456	annotation not available	Adhesion G protein-coupled receptor L2.	0.609
ENSODEP00000001735	ADGRL3	ENSODEP00000001735	ENSODEP00000002640	annotation not available	Adhesion G protein-coupled receptor L3.	0.609
ENSODEP00000001735	ENSODEP00000011754	ENSODEP00000001735	ENSODEP00000011754	annotation not available	annotation not available	0.629
ENSODEP00000001735	ENSODEP00000024866	ENSODEP00000001735	ENSODEP00000024866	annotation not available	annotation not available	0.705
ENSODEP00000001735	ENSODEP00000025351	ENSODEP00000001735	ENSODEP00000025351	annotation not available	annotation not available	0.841
ENSODEP00000001735	ENSODEP00000026159	ENSODEP00000001735	ENSODEP00000026159	annotation not available	annotation not available	0.629
ENSODEP00000001735	Eef1g	ENSODEP00000001735	ENSODEP00000002941	annotation not available	annotation not available	0.629
ENSODEP00000001735	MET	ENSODEP00000001735	ENSODEP00000001269	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.705