STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRG1Gamma-aminobutyric acid type A receptor gamma1 subunit. (433 aa)    
Predicted Functional Partners:
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit.
  
0.993
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
0.993
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
  
0.993
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
  
0.990
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
  
0.988
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
  
0.987
GABRA3
Gamma-aminobutyric acid type A receptor alpha3 subunit.
  
0.987
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.984
GABARAP
GABA type A receptor-associated protein.
    
 0.984
GABRA4
Gamma-aminobutyric acid type A receptor alpha4 subunit.
  
0.981
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.