Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001748annotation not available (178 aa)    
Predicted Functional Partners:
Nlgn3
Neuroligin 3.
   
 0.996
NLGN1
Neuroligin 1.
   
 0.996
Nlgn2
Neuroligin 2.
   
 0.995
ENSODEP00000000404
annotation not available
   
 0.983
NRXN2
Neurexin 2.
   
 
  0.974
NXPH1
Neurexophilin 1.
   
 
 0.953
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.953
NRXN3
Neurexin 3.
   
 
  0.945
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
 0.936
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.929
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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