STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
   
 0.983
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.933
MASP2
Mannan binding lectin serine peptidase 2.
    
 0.930
ENSODEP00000015069
annotation not available
     
 0.872
MBL2
Mannose binding lectin 2.
   
 
 0.844
C1S
Complement C1s.
    
 0.843
ENSODEP00000004889
annotation not available
    
 0.839
TNN
Tenascin N.
    
 0.839
TNR
Tenascin R.
    
 0.831
TNC
Tenascin C.
    
 0.831
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.