STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
  
0.937
MASP2
Mannan binding lectin serine peptidase 2.
    
 0.880
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.865
FCN1
Ficolin 1.
    
 0.846
MBL2
Mannose binding lectin 2.
   
 
0.836
TNN
Tenascin N.
    
 0.801
ENSODEP00000015069
annotation not available
     
0.793
TNR
Tenascin R.
    
 0.787
TNC
Tenascin C.
    
 0.787
ENSODEP00000013926
annotation not available
  
 
0.781
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.