STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOX4TOX high mobility group box family member 4. (619 aa)    
Predicted Functional Partners:
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.983
WDR82
WD repeat domain 82.
    
 0.983
ENSODEP00000012875
annotation not available
   
 0.978
ENSODEP00000011533
annotation not available
   
  0.942
Ppp1ca
annotation not available
   
  0.942
ENSODEP00000002736
annotation not available
   
  0.939
ENSODEP00000014033
annotation not available
   
  0.939
ENSODEP00000017186
annotation not available
   
  0.939
ACTR8
Actin related protein 8.
    
 0.901
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
   
  0.900
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.