Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF150Ring finger protein 150. (262 aa)    
Predicted Functional Partners:
SYNPO2
Synaptopodin 2.
   
 
 0.772
ARFIP1
ADP ribosylation factor interacting protein 1.
      
 0.757
ENSODEP00000017298
annotation not available
   
 
 0.755
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.718
ENSODEP00000026177
annotation not available
    
  0.691
ENSODEP00000026556
annotation not available
    
  0.691
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.683
RNF128
Ring finger protein 128.
   
 
 0.665
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.653
RXFP1
Relaxin family peptide receptor 1.
    
 0.653
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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