STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001769annotation not available (327 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.944
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
 0.930
ENSODEP00000001837
annotation not available
 
    
 0.891
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.884
NXPH1
Neurexophilin 1.
   
 
 0.841
NXPH2
Neurexophilin 2.
   
 
 0.841
ENSODEP00000000093
annotation not available
    
 0.831
ENSODEP00000000404
annotation not available
    
 0.831
Nlgn3
Neuroligin 3.
    
 0.831
ENSODEP00000007786
annotation not available
    
 0.831
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.