Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSRP3Cysteine and glycine rich protein 3. (194 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
   
 0.970
TCAP
Titin-cap.
   
 
 0.970
MYOZ2
Myozenin 2.
   
  
 0.965
CSRP2
Cysteine and glycine rich protein 2.
     
  0.960
MYL2
Myosin light chain 2.
   
  
 0.945
TNNT2
Troponin T2, cardiac type.
   
  
 0.933
CASQ2
Calsequestrin 2.
   
 
 0.931
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 0.904
CKM
Creatine kinase, M-type.
   
 
 0.902
MYOD1
Myogenic differentiation 1.
    
 
 0.900
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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