STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001773annotation not available (63 aa)    
Predicted Functional Partners:
CDC23
Cell division cycle 23.
   
 0.990
CDC27
Cell division cycle 27.
   
 0.990
CDC16
Cell division cycle 16.
   
 0.989
ANAPC7
Anaphase promoting complex subunit 7.
   
 0.989
ANAPC5
Anaphase promoting complex subunit 5.
   
 0.989
ANAPC2
Anaphase promoting complex subunit 2.
   
 0.988
CDC26
Cell division cycle 26.
   
 0.988
CDC20
Cell division cycle 20.
    
 0.987
ENSODEP00000009318
annotation not available
   
 0.986
ENSODEP00000010633
annotation not available
    
 0.980
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.