Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXCL10C-X-C motif chemokine ligand 10. (98 aa)    
Predicted Functional Partners:
CXCL11
C-X-C motif chemokine ligand 11.
   
 0.999
CXCL9
C-X-C motif chemokine ligand 9.
   
 0.999
CCL5
C-C motif chemokine ligand 5.
   
 0.995
CX3CR1
C-X3-C motif chemokine receptor 1.
    
 0.991
ENSODEP00000002777
annotation not available
   
 
 0.990
CXCL12
C-X-C motif chemokine ligand 12.
   
 0.990
CCL21
C-C motif chemokine ligand 21.
   
 0.990
CXCR3
C-X-C motif chemokine receptor 3.
    
 0.989
CCL11
C-C motif chemokine ligand 11.
   
 0.989
ENSODEP00000008984
annotation not available
   
 0.988
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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