Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001778annotation not available (335 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.999
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.999
ENSODEP00000011834
annotation not available
    
 0.999
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.999
ENSODEP00000023917
annotation not available
    
 0.998
ENSODEP00000024612
annotation not available
    
 0.995
TNKS2
Tankyrase 2.
    
 0.969
ENSODEP00000011039
annotation not available
    
 0.969
TNKS
Tankyrase.
    
 0.963
PAXIP1
PAX interacting protein 1.
    
 0.949
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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