STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS2Regulating synaptic membrane exocytosis 2. (1508 aa)    
Predicted Functional Partners:
UNC13A
Unc-13 homolog A.
    
 0.999
RAB3B
RAB3B, member RAS oncogene family.
    
 0.999
RIMBP2
RIMS binding protein 2.
    
 0.999
TSPOAP1
TSPO associated protein 1.
    
 0.999
RAB3A
RAB3A, member RAS oncogene family.
    
 0.999
UNC13B
Unc-13 homolog B.
    
0.999
ENSODEP00000021135
annotation not available
    
 0.999
ENSODEP00000021504
annotation not available
    
 0.999
RAB3C
RAB3C, member RAS oncogene family.
    
 0.999
PPFIA2
PTPRF interacting protein alpha 2.
    
 0.996
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.