ENSODEP00000001787 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

ENSODEP00000001787

annotation not available (409 aa)

Predicted Functional Partners:

QTRT1

0.985

PTS

0.644

AGA

0.642

HDDC2

0.608

ELAC2

0.600

GART

0.578

ENSODEP00000000912

0.569

ENSODEP00000008355

0.569

TRMU

0.557

MTHFD2L

0.552

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGA	ENSODEP00000001787	ENSODEP00000004771	ENSODEP00000001787	Aspartylglucosaminidase.	annotation not available	0.642
ELAC2	ENSODEP00000001787	ENSODEP00000000537	ENSODEP00000001787	elaC ribonuclease Z 2.	annotation not available	0.600
ENSODEP00000000912	ENSODEP00000001787	ENSODEP00000000912	ENSODEP00000001787	annotation not available	annotation not available	0.569
ENSODEP00000000912	QTRT1	ENSODEP00000000912	ENSODEP00000021599	annotation not available	Queuine tRNA-ribosyltransferase catalytic subunit 1.	0.661
ENSODEP00000001787	AGA	ENSODEP00000001787	ENSODEP00000004771	annotation not available	Aspartylglucosaminidase.	0.642
ENSODEP00000001787	ELAC2	ENSODEP00000001787	ENSODEP00000000537	annotation not available	elaC ribonuclease Z 2.	0.600
ENSODEP00000001787	ENSODEP00000000912	ENSODEP00000001787	ENSODEP00000000912	annotation not available	annotation not available	0.569
ENSODEP00000001787	ENSODEP00000008355	ENSODEP00000001787	ENSODEP00000008355	annotation not available	annotation not available	0.569
ENSODEP00000001787	GART	ENSODEP00000001787	ENSODEP00000004873	annotation not available	annotation not available	0.578
ENSODEP00000001787	HDDC2	ENSODEP00000001787	ENSODEP00000006728	annotation not available	HD domain containing 2.	0.608
ENSODEP00000001787	MTHFD2L	ENSODEP00000001787	ENSODEP00000009635	annotation not available	Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.	0.552
ENSODEP00000001787	PTS	ENSODEP00000001787	ENSODEP00000000177	annotation not available	6-pyruvoyltetrahydropterin synthase.	0.644
ENSODEP00000001787	QTRT1	ENSODEP00000001787	ENSODEP00000021599	annotation not available	Queuine tRNA-ribosyltransferase catalytic subunit 1.	0.985
ENSODEP00000001787	TRMU	ENSODEP00000001787	ENSODEP00000019977	annotation not available	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.	0.557
ENSODEP00000008355	ENSODEP00000001787	ENSODEP00000008355	ENSODEP00000001787	annotation not available	annotation not available	0.569
ENSODEP00000008355	QTRT1	ENSODEP00000008355	ENSODEP00000021599	annotation not available	Queuine tRNA-ribosyltransferase catalytic subunit 1.	0.663
GART	ENSODEP00000001787	ENSODEP00000004873	ENSODEP00000001787	annotation not available	annotation not available	0.578
GART	MTHFD2L	ENSODEP00000004873	ENSODEP00000009635	annotation not available	Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.	0.997
GART	PTS	ENSODEP00000004873	ENSODEP00000000177	annotation not available	6-pyruvoyltetrahydropterin synthase.	0.455
GART	QTRT1	ENSODEP00000004873	ENSODEP00000021599	annotation not available	Queuine tRNA-ribosyltransferase catalytic subunit 1.	0.578