Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETV5ETS variant transcription factor 5. (512 aa)    
Predicted Functional Partners:
COP1
COP1 E3 ubiquitin ligase.
    
 
 0.956
STK40
Serine/threonine kinase 40.
    
   0.950
Det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.935
SRF
Serum response factor.
    
 0.846
ETV1
ETS variant transcription factor 1.
   
   0.823
RUNX1
RUNX family transcription factor 1.
   
 0.732
RUNX3
RUNX family transcription factor 3.
   
 0.732
RUNX2
RUNX family transcription factor 2.
   
 0.732
ID4
Inhibitor of DNA binding 4, HLH protein.
     
 0.727
SPRY1
Sprouty RTK signaling antagonist 1.
      
 0.717
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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