Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNGA2Cyclic nucleotide gated channel subunit alpha 2. (663 aa)    
Predicted Functional Partners:
CNGA4
Cyclic nucleotide gated channel subunit alpha 4.
  
0.998
ENSODEP00000022691
annotation not available
  
0.996
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.988
ENSODEP00000022485
annotation not available
   
 0.986
CALML3
Calmodulin like 3.
    
 0.982
CALML4
Calmodulin like 4.
    
 0.979
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
  
 
0.948
ENSODEP00000001196
annotation not available
    
 0.946
ENSODEP00000001330
annotation not available
    
 0.946
CALM3
Calmodulin 3.
    
 0.946
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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