Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFCAB9EF-hand calcium binding domain 9. (196 aa)    
Predicted Functional Partners:
ENSODEP00000010644
annotation not available
    
 0.974
TMEM262
Transmembrane protein 262.
    
 
 0.934
SLCO4A1
Solute carrier organic anion transporter family member 4A1.
   
 
 0.889
SYNJ2BP-COX16
SYNJ2BP-COX16 readthrough.
    
 0.883
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
    
 0.854
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
 0.854
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
    
 0.854
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.844
MYO3A
Myosin IIIA.
    
 0.836
MYO3B
Myosin IIIB.
    
 0.836
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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