Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HAS1Hyaluronan synthase 1. (580 aa)    
Predicted Functional Partners:
DELE1
DAP3 binding cell death enhancer 1.
  
 0.881
KDM6A
Lysine demethylase 6A.
  
 0.848
KDM6B
Lysine demethylase 6B.
  
 0.848
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 0.843
ILVBL
ilvB acetolactate synthase like.
  
 0.843
GMPPB
GDP-mannose pyrophosphorylase B.
  
 
 0.825
MYO9B
Myosin IXB.
    
 0.823
MYO9A
Myosin IXA.
    
 0.823
ENSODEP00000004888
annotation not available
  
 
 0.822
ENSODEP00000015052
annotation not available
  
 
 0.822
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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