ENSODEP00000001843 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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gene co-occurrence

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[Homology]

Score

ENSODEP00000001843

annotation not available (534 aa)

Predicted Functional Partners:

TRAF7

0.814

ENSODEP00000025351

0.768

ENSODEP00000006683

0.762

ERI1

0.757

ANKLE2

0.752

ENSODEP00000001778

0.699

ATP5IF1

0.675

PTK7

0.661

EFCAB2

0.654

IFT88

0.651

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKLE2	ENSODEP00000001778	ENSODEP00000012711	ENSODEP00000001778	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.513
ANKLE2	ENSODEP00000001843	ENSODEP00000012711	ENSODEP00000001843	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.752
ANKLE2	ENSODEP00000025351	ENSODEP00000012711	ENSODEP00000025351	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.433
ANKLE2	PTK7	ENSODEP00000012711	ENSODEP00000021359	Ankyrin repeat and LEM domain containing 2.	Protein tyrosine kinase 7 (inactive).	0.513
ANKLE2	TRAF7	ENSODEP00000012711	ENSODEP00000018251	Ankyrin repeat and LEM domain containing 2.	TNF receptor associated factor 7.	0.706
ATP5IF1	ENSODEP00000001843	ENSODEP00000004939	ENSODEP00000001843	ATP synthase inhibitory factor subunit 1.	annotation not available	0.675
EFCAB2	ENSODEP00000001843	ENSODEP00000018337	ENSODEP00000001843	EF-hand calcium binding domain 2.	annotation not available	0.654
EFCAB2	ENSODEP00000025351	ENSODEP00000018337	ENSODEP00000025351	EF-hand calcium binding domain 2.	annotation not available	0.487
ENSODEP00000001778	ANKLE2	ENSODEP00000001778	ENSODEP00000012711	annotation not available	Ankyrin repeat and LEM domain containing 2.	0.513
ENSODEP00000001778	ENSODEP00000001843	ENSODEP00000001778	ENSODEP00000001843	annotation not available	annotation not available	0.699
ENSODEP00000001843	ANKLE2	ENSODEP00000001843	ENSODEP00000012711	annotation not available	Ankyrin repeat and LEM domain containing 2.	0.752
ENSODEP00000001843	ATP5IF1	ENSODEP00000001843	ENSODEP00000004939	annotation not available	ATP synthase inhibitory factor subunit 1.	0.675
ENSODEP00000001843	EFCAB2	ENSODEP00000001843	ENSODEP00000018337	annotation not available	EF-hand calcium binding domain 2.	0.654
ENSODEP00000001843	ENSODEP00000001778	ENSODEP00000001843	ENSODEP00000001778	annotation not available	annotation not available	0.699
ENSODEP00000001843	ENSODEP00000006683	ENSODEP00000001843	ENSODEP00000006683	annotation not available	annotation not available	0.762
ENSODEP00000001843	ENSODEP00000025351	ENSODEP00000001843	ENSODEP00000025351	annotation not available	annotation not available	0.768
ENSODEP00000001843	ERI1	ENSODEP00000001843	ENSODEP00000006106	annotation not available	Exoribonuclease 1.	0.757
ENSODEP00000001843	IFT88	ENSODEP00000001843	ENSODEP00000008758	annotation not available	Intraflagellar transport 88.	0.651
ENSODEP00000001843	PTK7	ENSODEP00000001843	ENSODEP00000021359	annotation not available	Protein tyrosine kinase 7 (inactive).	0.661
ENSODEP00000001843	TRAF7	ENSODEP00000001843	ENSODEP00000018251	annotation not available	TNF receptor associated factor 7.	0.814