PLEKHG1 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PLEKHG1

Pleckstrin homology and RhoGEF domain containing G1. (1377 aa)

Predicted Functional Partners:

RHOG

0.905

ENSODEP00000014156

0.868

ENSODEP00000021414

0.868

ENSODEP00000026039

0.868

ENSODEP00000026242

0.868

ENSODEP00000026747

0.868

RHOU

0.867

ENSODEP00000008436

0.867

RAC3

0.867

ENSODEP00000014213

0.867

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000008436	ENSODEP00000014156	ENSODEP00000008436	ENSODEP00000014156	annotation not available	annotation not available	0.912
ENSODEP00000008436	ENSODEP00000021414	ENSODEP00000008436	ENSODEP00000021414	annotation not available	annotation not available	0.912
ENSODEP00000008436	ENSODEP00000026039	ENSODEP00000008436	ENSODEP00000026039	annotation not available	annotation not available	0.912
ENSODEP00000008436	ENSODEP00000026242	ENSODEP00000008436	ENSODEP00000026242	annotation not available	annotation not available	0.912
ENSODEP00000008436	ENSODEP00000026747	ENSODEP00000008436	ENSODEP00000026747	annotation not available	annotation not available	0.912
ENSODEP00000008436	PLEKHG1	ENSODEP00000008436	ENSODEP00000001847	annotation not available	Pleckstrin homology and RhoGEF domain containing G1.	0.867
ENSODEP00000008436	RAC3	ENSODEP00000008436	ENSODEP00000010521	annotation not available	Rac family small GTPase 3.	0.974
ENSODEP00000008436	RHOG	ENSODEP00000008436	ENSODEP00000012934	annotation not available	Ras homolog family member G.	0.904
ENSODEP00000014156	ENSODEP00000008436	ENSODEP00000014156	ENSODEP00000008436	annotation not available	annotation not available	0.912
ENSODEP00000014156	ENSODEP00000014213	ENSODEP00000014156	ENSODEP00000014213	annotation not available	annotation not available	0.912
ENSODEP00000014156	PLEKHG1	ENSODEP00000014156	ENSODEP00000001847	annotation not available	Pleckstrin homology and RhoGEF domain containing G1.	0.868
ENSODEP00000014156	RAC3	ENSODEP00000014156	ENSODEP00000010521	annotation not available	Rac family small GTPase 3.	0.896
ENSODEP00000014156	RHOG	ENSODEP00000014156	ENSODEP00000012934	annotation not available	Ras homolog family member G.	0.654
ENSODEP00000014156	RHOU	ENSODEP00000014156	ENSODEP00000005772	annotation not available	Ras homolog family member U.	0.597
ENSODEP00000014213	ENSODEP00000014156	ENSODEP00000014213	ENSODEP00000014156	annotation not available	annotation not available	0.912
ENSODEP00000014213	ENSODEP00000021414	ENSODEP00000014213	ENSODEP00000021414	annotation not available	annotation not available	0.912
ENSODEP00000014213	ENSODEP00000026039	ENSODEP00000014213	ENSODEP00000026039	annotation not available	annotation not available	0.912
ENSODEP00000014213	ENSODEP00000026242	ENSODEP00000014213	ENSODEP00000026242	annotation not available	annotation not available	0.912
ENSODEP00000014213	ENSODEP00000026747	ENSODEP00000014213	ENSODEP00000026747	annotation not available	annotation not available	0.912
ENSODEP00000014213	PLEKHG1	ENSODEP00000014213	ENSODEP00000001847	annotation not available	Pleckstrin homology and RhoGEF domain containing G1.	0.867