STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLK13Kallikrein related peptidase 13. (278 aa)    
Predicted Functional Partners:
SPINK6
Serine peptidase inhibitor, Kazal type 6.
    
 0.913
SERPINE2
Serpin family E member 2.
   
 0.894
ENSODEP00000017953
annotation not available
   
 0.861
CTRL
Chymotrypsin like.
   
 0.861
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
    
 0.861
F2RL3
F2R like thrombin or trypsin receptor 3.
    
 0.857
F2RL1
F2R like trypsin receptor 1.
    
 0.825
AGT
Angiotensinogen.
   
 0.815
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
 0.811
APP
Amyloid beta precursor protein.
    
 0.800
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.